Rank #2,975 2,590 starsPython

scanpy

by scverse (organization)

Single-cell analysis in Python. Scales to >100M cells. (description from the project’s GitHub page)

Repository facts

Stars: 2,590
Forks: 797
Open issues and pull requests: 556
Primary language: Python
License: BSD 3-Clause "New" or "Revised" License (BSD-3-Clause)
Owner: scverse · Organization
Created: Jan 29, 2017
Last push: Oct 15, 2026

Topics

Rank #2,975 of 9,507 in AI on GitHub, by stars. Data from the GitHub API, fetched Oct 18, 2026; star counts change daily. Stars measure popularity, not quality or safety, and a listing is not an endorsement. How this list is made

Add this badge to your README

Ranked #2,975 in AI on GitHub Shows this repository’s rank in AI on GitHub and links back to this page. Ranks are by stars and change when the list is refreshed. The badge is not an endorsement or a rating. About the badges

Markdown (for a README)

[![Ranked #2,975 in AI on GitHub](https://unitedstatesofamericasuperintelligence.com/badges/github/scverse--scanpy.svg)](https://unitedstatesofamericasuperintelligence.com/github/scverse--scanpy/)

HTML

<a href="https://unitedstatesofamericasuperintelligence.com/github/scverse--scanpy/"><img src="https://unitedstatesofamericasuperintelligence.com/badges/github/scverse--scanpy.svg" alt="Ranked #2,975 in AI on GitHub" height="20"></a>

Projects that share this one’s GitHub topics.

Rank 8,003: cafferychen777/mLLMCelltype
Cell type annotation for single-cell RNA-seq using multi-LLM consensus
661 starsPythonMITLast push Sep 28, 2026
Rank 341: plotly/dash
Data Apps & Dashboards for Python. No JavaScript Required.
24,457 starsPythonMITLast push Oct 15, 2026
Rank 4,141: scverse/scvi-tools
Deep probabilistic analysis of single-cell and spatial omics data
1,713 starsPythonBSD-3-ClauseLast push Oct 15, 2026
Rank 1,486: ashishpatel26/Tools-to-Design-or-Visualize-Architecture-of-Neural-Network
Tools to Design or Visualize Architecture of Neural Network
5,408 starsNo license file detectedLast push Aug 1, 2025
Rank 75: scikit-learn/scikit-learn
scikit-learn: machine learning in Python
67,738 starsPythonBSD-3-ClauseLast push Oct 18, 2026
Rank 81: keras-team/keras
Deep Learning for humans
64,375 starsPythonApache-2.0Last push Oct 16, 2026

Repository facts

Topics

Add this badge to your README

Related projects

Rank 8,003: cafferychen777/mLLMCelltype

Rank 341: plotly/dash

Rank 4,141: scverse/scvi-tools

Rank 1,486: ashishpatel26/Tools-to-Design-or-Visualize-Architecture-of-Neural-Network

Rank 75: scikit-learn/scikit-learn

Rank 81: keras-team/keras

Support Us